List of Publications -2013

1193.   Sundaramurthi JC, Ramanathan VD, Hanna LE. HLA-B*27:05-Specific Cytotoxic T lymphocyte epitopes in Indian HIV type 1C. AIDS Res Hum Retroviruses.2013;29:47-53.           

1194.   Kumar D, Kannan P, Challu VK, Kumar P, Narayanan S. PknE, a serine/threonine protein kinase from Mycobacterium tuberculosis has a role in adaptive responses. Arch Microbiol .2013;195:75-80.     

        

1195.   Radhakrishnan M, Gopikrishnan V, Suresh A, Selvakumar N, Balagurunathan R, Kumar V. Characterization and phylogenetic analysis of antituberculous compound producing actinomycete strain D25 isolated from Thar Desert soil, Rajasthan. Bioinformation.2013;9:18-22.                 

 

1196.   Balaji S, Gomathi S, Azger D, Kumar V. Phage lysin to control the overgrowth of normal flora in processed sputum samples for the rapid and sensitive detection of Mycobacterium tuberculosis by luciferase reporter phage assay. BMC Infect Dis.2013;13:1-5.                    

1197.   Venkatesan P, Yamuna NR. Treatment response classification in randomized clinical trials:A decision tree approach. Indian J Sci Technol.2013; 6:74-79.

 

1198.    Venkatesan P, Thomas T. A comparative study of neural network architectures for predicting gene expression in M.tuberculosis . Int J Pharma Biosci.2013;4: 965-972.

 

1199.   Venkatesan P, Mullai M. Clustering of disease data base using self organizing maps and logical inference. Indian J Automation Artificial Intelligence.2013;1:2-6.   

 

1200.   Kripasankar AS, Ravanan R, Ponnuraja C. Survival analysis: Kaplan-Meier and life table estimates for time to event clinical trial tuberculosis data. Concepts in Pure App Sci.2013;1:17-21.         

 

1201.   Meena Devi G, Venkatesan P. Least squares support vector regression for spirometric forced expiratory volume (FEV 1 ) values. Int J Sci Technol.2013;3: 74-78.

 

1202.   Mehendale S, Thakar M, Sahay S, Kumar M, Shete A, Sathyamurthi P, Verma A, Kurle S, Shrotri A, Gilmour J, Goyal R, Dally L, Sayeed E, Zachariah D, Ackland J, Kochhar S, Cox JH, Excler JL, Kumaraswami V , Paranjape R, Ramanathan VD. Safety and immunogenicity of DNA and MVA HIV-1 subtype C vaccine prime-boost regimens: A phase I randomized trial in HIV-uninfected Indian volunteers. PLoS One .2013;8:e55831.             

 

1203.   Pavan Kumar N, Sridhar R, Banurekha VV, Nair D, Jawahar MS, Nutman TB, Babu S . Expansion of pathogen-specific mono- and multifunctional Th1 and Th17 cells in multi-focal tuberculous lymphadenitis. PLoS One .2013;8:e57123.   

 

1204.   Rekha B , Jagarajamma K, Chandrasekaran V, Wares F, Sivanandham R, Swaminathan S. Improving screening and chemoprophylaxis among child contacts in India 's RNTCP: A pilot study. Int J Tuberc Lung Dis .2013;17:163-168.       

1205.   Chadha VK, Sarin R, Narang P, John KR, Chopra KK, Jitendra R, Mendiratta DK, Vohra V, Shashidhara AN, Muniraj G, Gopi PG, Kumar P. Trends in the annual risk of tuberculous infection in India. Int J Tuberc Lung Dis.2013; 17:312-319.

1206.   Graham SM, Casenghi M, Jean-Philippe P, Hatherill M, Hesseling AC, Nachman S, Starke JR, Swaminathan S, Cuevas LE. Reply to Holm et al . J Infect Dis .2013; 207:871-872.           

1207.   Anbarasu D, Ponnuraja C, Raja A. Multiplex analysis of cytokines/chemokines as biomarkers that differentiate healthy contacts from tuberculosis patients in high endemic settings. Cytokine.2013;61:747-754.         

1208.   Lakshmi R, Ranjani R, Syam Sundar A, Rehman F, Radhika G, Kumar V. Optimization of the conventional minimum inhibitory concentration method for drug susceptibility testing of ethionamide. Int J Mycobacteriol.2013;2:29-33.

1209.   Pavan Kumar N, Gopinath V, Sridhar R, Hanna LE, Banurekha VV, Jawahar MS, Nutman TB, Babu S . IL-10 dependent suppression of type 1, type 2 and type 17 cytokines in active pulmonary tuberculosis. PLoS One .2013;8:e59572.

1210.   Anbarasu D, Prabhavathi M, Raja A. Comparison of whole blood and PBMC assays for T-cell functional analysis. BMC Res Notes .2013; 6: 1-5.   

 

1211.   Ragunath PK , Ravi Mohan R, Venkatesan P. A study on relevance of student's attitude, implementing an interdisciplinary approach in a post graduate program. Procedia Computer Science;2013;18: 218-229.         

 

1212 .   Suhadev M, Mahadevan U, Thomas BE, Swaminathan S. Perceived social support among the spouses of men living with HIV infection. Int J Public Health Epid.2013;2:66-71.         

 

1213.   Thomas A, Vasantha M, Chandrasekaran V, Lakshmi M, Gopi PG. Reliability of involving community volunteers as DOT providers in DOTS strategy under RNTCP. Indian J Tuberc.2013;60:89-94.           

 

1214.   Marais BJ, Lönnroth K, Lawn SD , Migliori GB, Mwaba P, Glaziou P, Bates M, Colagiuri R, Zijenah L, Swaminathan S, Memish ZA, Pletschette M, Hoelscher M, Abubakar I, Hasan R, Zafar A, Pantaleo G, Craig G, Kim P, Maeurer M, Schito M, Zumla A. Tuberculosis comorbidity with communicable and non-communicable diseases:integrating health services and control efforts. Lancet Infect Dis .2013; 13:436-448.               

 

1215.   Pavan Kumar N, Anuradha R , Andrade BB , Suresh N, Ganesh R , Shankar J, Kumaraswami V , Nutman TB, Babu S. Circulating biomarkers of pulmonary and extra-pulmonary tuberculosis in children. Clin Vaccine Immunol. 2013; 20 : 704 - 711.                   

1216.   Andrade BB, Pavan Kumar N, Mayer-Barber KD, Barber DL, Sridhar R, Rekha VV, Jawahar MS, Nutman TB, Sher A, Babu S. Plasma heme oxygenase-1 levels distinguish latent or successfully treated human tuberculosis from active disease. PLoS One. 2013;8:e62618.               

 

1217.   George PJ, Anuradha R, Kumaran PP, Chandrasekaran V, Nutman TB, Babu S . Modulation of mycobacterial-specific Th1 and Th17 cells in latent tuberculosis by coincident hookworm infection. J Immunol .2013;190:5161-5168.

 

1218.   Damodharan S, Gujar R, Pattabiraman S, Nesakumar M, Hanna LE, Ramanathan VD, Usha R. Expression and immunological characterization of cardamom mosaic virus coat protein displaying HIV gp41 epitopes. Microbiol Immunol .2013;57:374-385.               

 

1219.    Narendran G, Andrade BB, Porter BO, Chandrasekhar C, Venkatesan P, Menon PA, Subramanian S, Anbalagan S, Bhavani KP, Sekar S, Padmapriyadarshini C, Kumar S, Ravichandran N, Raja K, Bhanu K, Mahilmaran A, Sekar L, Sher A, Sereti I, Swaminathan S. Paradoxical tuberculosis immune reconstitution inflammatory syndrome (TB-IRIS) in HIV patients with culture confirmed pulmonary tuberculosis in India and the potential role of IL-6 in prediction. PLoS One .2013;8:e63541.

  

1220.   Venkatesh KK, Becker JE , Kumarasamy N , Nakamura YM, Mayer KH , Losina E , Swaminathan S , Flanigan TP , Walensky RP , Freedberg KA. Clinical impact and cost-effectiveness of expanded voluntary HIV testing in India . PLoS One. 2013;8: e64604.               

 

1221 .   Dayal PL, Alexander LT, Ponnuraja C, Rama R, Venkatesan P. Modelling of time to event breast cancer data using accelerated failure time in south India women. Global Res Analysis Int.2013;2:192-194.           

 

1222.   Radha RK, Venkatesan P. On the double prior selection for the parameter of Maxwell distribution. Int J Scientific & Eng Res.2013;4:1238-1241.   

 

1223. Ramachandran G, Hemanth Kumar AK, Bhavani PK , Ganga Devi NP , Sekar L, Vijayasekaran D, Banu Rekha VV, Ramesh Kumar S, Ravichandran N, Mathevan G, Swaminathan S. Age, nutritional status and INH acetylator status affect pharmacokinetics of anti-tuberculosis drugs in children . Int J Tuberc Lung Dis.2013;17:800-806.                 

1224.   Lakshmi R, R anjani R, Devika K , Radhika G , Syam Sundar A , Rahman F , Selvakumar N , Kumar V. Modification of proportion sensitivity testing method for ethionamide. World J Microbiol Biotechnol. 2013;29:1117-1119.     

1225.   Seddon JA, Perez-Velez CM, Schaaf HS, Furin JJ, Marais BJ, Tebruegge M, Detjen A, Hesseling AC, Shah S, Adams LV, Starke JR, Swaminathan S, Becerra MC; on Behalf of the sentinel project on pediatric drug-resistant tuberculosis. Consensus statement on research definitions for drug-resistant tuberculosis in children. J Pediatric Infect Dis Soc .2013;2:100-109.         

1226. Narayanan S, Deshpande U. Whole-Genome sequences of four clinical isolates of Mycobacterium tuberculosis from Tamil Nadu, South India . Genome Announc. 2013 ; 1:1.    

1227. Chandrasekaran P, Tripathy S, Sekar L, Bhavani PK, Gaikwad N, Annadurai S, Narendran G, Selvakumar N, Risbud AR, Sheta D, Rajasekaran S, Thomas A, Wares F, Swaminathan S. Evaluation of a diagnostic algorithm for sputum smear–negative pulmonary tuberculosis in HIV-infected adults. J Acquir Immune Defic Syndr.2013; 63:331-338.            

1228. Jawahar MS, Banurekha VV, Paramasivan CN, Rahman F, Ramachandran R, Venkatesan P, Balasubramanian R, Selvakumar N , Ponnuraja C, Iliayas AS, Gangadevi NP, Raman B, Baskaran D, Kumar SR, Kumar MM, Mohan V, Ganapathy S, Kumar V, Shanmugam G, Charles N, Sakthivel MR, Jagannath K, Chandrasekar C, Parthasarathy RT, Narayanan PR. Randomized clinical trial of thrice-weekly 4-month moxifloxacin or gatifloxacin containing regimens in the treatment of new sputum positive pulmonary tuberculosis patients . PLoS One .2013;8:e67030.       

 

1229. Srinivasan R, Venkatesan P . Bayesian kriging of tuberculosis in Chennai: A small scale analysis. Indian J App Res.2013;3:480-482.       

 

1230. Ramya A, Kumar K, Ganesh M, Kumar AMV, Nalini K, Swaminathan S, Edginton M, Arunagiri K, Gupta D. The profile and treatment outcomes of the older (aged 60 years and above) tuberculosis patients in Tamilnadu, south India . PLoS One;2013;8:e67288.                 

1231. Kolappan C , Subramani R , Radhakrishna S , Santha T , Wares F , Baskaran D , Selvakumar N , Narayanan PR . Trends in the prevalence of pulmonary tuberculosis over a period of seven and half years in a rural community in south India with DOTS. Indian J Tuberc. 2013;60:168-176.    

     

1232.   Harini L, Narayanan S. Comparative genomic analysis of mycobacteria (actinobacteria): redundancy in function among serine threonine protein kinases. Global J Bio-Sci Biotechnol.2013;2:393-398.         

 

1233. Suba S, Narayanan S. The lpqS knockout mutant of Mycobacterium tuberculosis is attenuated in Macrophages. Microbiol Res.2013;168:407-414.

1234. Gomathi S, Balaji S, P onnuraja C, Kumar V. Luciferase reporter phage phAE85 for rapid detection of rifampicin resistance in clinical isolates of Mycobacterium tuberculosis . Asian Pac J Trop Med.2013;6:728-731.       

1235. Pavan Kumar N, Sridhar R, Banurekha VV, Jawahar MS, Nutman TB, Babu S . Expansion of pathogen - specific T-Helper 1 and T-Helper 17 cells in pulmonary tuberculosis with coincident type 2 diabetes mellitus. J Infect Dis .2013;208: 739 - 748.

 

1236. Radhakrishnan R, Prabuseenivasan S, Balaji S, Sankar U, Thomas A, Kumar V, Selvakumar N . Blinded rechecking of acid-fast bacilli smears by light-emitting diode microscopy. Int J Tuberc Lung Dis .2013;17:1220-1223.     

 

1237.  Ramachandran G, Chandrasekaran V, Hemanth Kumar AK, Dewan P, Swaminathan S, Thomas A. Estimation of content of anti-TB drugs supplied at centres of the Revised National TB control programme in Tamil Nadu, India. Trop Med Int Health .2013;18:1141-1144.           

 

1238. Anuradha R, George PJ, Hanna LE, Chandrasekaran V, Kumaran P, Nutman TB, Babu S . IL-4-, TGF-ß-, and IL-1-dependent expansion of parasite antigen-specific Th9 cells is associated with clinical pathology in human lymphatic filariasis. J Immunol .2013;191:2466-2473.               

 

1239. Lagrange PH, Thangaraj SK , Dayal R , Deshpande A , Ganguly NK , Girardi E , Joshi B , Katoch K , Katoch VM , Kumar M, Lakshmi V , Leportier M, Longuet C , Malladi SV , Mukerjee D , Nair D , Raja A , Raman B, Rodrigues C , Sharma P , Singh A , Singh S , Sodha A , Kabeer BS, Vernet G , Goletti D. A toolbox for tuberculosis (TB) diagnosis: An Indian multicentric study (2006-2008). Evaluation of QuantiFERON-TB gold in tube for TB diagnosis. PLoS One.2013;8:e73579.       

 

1240. Poorana Ganga Devi NP , Swaminathan S . Drug-resistant tuberculosis: Pediatric guidelines. Curr Infect Dis Rep.2013;15:356-363.       

 

1241. Chockalingam K, Vedhachalam C , Rangasamy S , Sekar G , Adinarayanan S , Swaminathan S , Menon PA . Prevalence of tobacco use in urban, semi urban and rural areas in and around Chennai City , India . PLoS One. 2013;8:e76005.

 

1242 .   Pavan Kumar N, Sridhar R, Banurekha VV, Jawahar MS, Fay MP, Nutman TB, Babu S . Type 2 diabetes mellitus coincident with pulmonary tuberculosis is associated with heightened systemic type 1, type 17, and other proinflammatory cytokines. Ann Am Thorac Soc .2013;10:441-449.         

 

1243.    Sekar G, Kumar V, Gomathi NS, Selvakumar N. Exposure to cetyl pyridinium chloride and loss of integrity of cell wall of mycobacteria. Indian J Tuberc.2013;60:223-226.                 

 

1244.    Somasundaram S, Anand RS, Venkatesan P , Paramasivan CN. Bactericidal activity of PA-824 against Mycobacterium tuberculosis under anaerobic conditions and computational analysis of its novel analogues against mutant Ddn receptor. BMC Microbiol .2013;13:218:1-13.           

 

1245.    Shiny A, Regin B , Balachandar V, Gokulakrishnan K, Mohan V, Babu S , Balasubramanyam M. Convergence of innate immunity and insulin resistance as evidenced by increased nucleotide oligomerization domain (NOD) expression and signaling in monocytes from patients with type 2 diabetes. Cytokine.2013;64:564-570.             

 

1246. Gopal R , Monin L , Torres D , Slight S , Mehra S , McKenna K , Fallert Junecko BA , Reinhart TA , Kolls J , Báez-Saldaña R , Cruz-Lagunas A , Rodríguez-Reyna TS , Pavan Kumar N , Tessier P , Roth J , Selman M , Becerril-Villanueva E , Baquera-Heredia J, Cumming B , Kasprowicz VO , Steyn AJ , Babu S , Kaushal D , Zúñiga J , Vogl T , Rangel-Moreno J , Khader SA . S100A8/A9 proteins mediate neutrophilic inflammation and lung pathology during tuberculosis. Am J Respir Crit Care Med.2013;188:1137-1146.

1247.   Ramachandran G, Bhavani PK, Hemanth Kumar AK, Srinivasan R, Raja K, Sudha V, Venkatesh S, Chandrasekaran C, Swaminathan S. Pharmacokinetics of rifabutin during atazanavir/ritonavir co-administration in HIV-infected TB patients in India. Int J Tuberc Lung Dis.2013;17:1564–1568.       

1248.   Anbalagan S, Kanthikeel SP, Bhavani PK , Hanna LE, Pahwa S, Swaminathan S. Defective dendritic cell response to toll like receptor 7/8 agonists in perinatally HIV infected children. Pathog Dis.2013;69:184-193.       

1249.    Padmapriyadarsini C, Bhavani PK , Tang A, Kumar H, Ponnuraja C, Narendran G, Hannah E, Ramesh C, Chandrasekar C, Wanke C, Swaminathan S. Early changes in hepatic function among HIV-tuberculosis patients treated with nevirapine or efavirenz along with rifampin-based anti-tuberculosis therapy. Int J Infect Dis .2013;17: e1154-1159.

1250. Premalatha V, Venkatesan P. A genetic algorithm based approach for comparative docking analsyis of breast cancer susceptibility protein with circumin. Int J Pharm Bio Sci 2013;4:325-338.             

1251.   Lukshmi RA, Geetha PV, Venkatesan P. Rough set theory approach for attribute reduction. Indian J Automation & Artificial Intelligence.2013;1:70-80.

 

1252.   Radha RK, Venkatesan P. Bayes estimator as a function of some classical estimator for power function distribution. Int J Statistics and Analysis. 2013;3: 105-109.

 

1253.   Venkatesan P, Fathima J. Identification of differentially expressed genes by unsupervised learning method. Int J Data Mining Techniq App.2013;2:121-125.

 

1254.   Papitha N, Jayshree N, Prabu Seenivasan S, Kumar V. Anti-tubercular activity on leaves and roots of Sida rhombifolia L. Int J Pharm Sci Rev Res.2013;20:135-137.

  

1255.   Venkatesan P, Vasantha M. Insights from the clustering of microarray data associated with the heart disease. Bioinformation.2013;9:759-765.   

 

1256.   Maheshkumar V, Madhavan R, Narayanan S, Lakshmi R. katG gene as a surrogate molecular marker leading to cause drug resistance in Mycobacterium tuberculosis isolates. American J Infect Dis Microbiol.2013;1:86-91.     

 

1257.    Aravindhan V, Mohan V, Madhumitha H, Valarmathi S, Babu S. Increased levels of endotoxin core antibodies and decreased levels of sCD14 indicate chronic endotoxemia in coronary artery disease (CURES-127). J Clin Exp Cardiolog. 2013;4:264.             

 

1258.   Narendran G, Swaminathan S. Tuberculosis immune reconstitution inflammatory syndrome: profile of an enigmatic condition. Curr Sci.2013;105:657-665.

 

1259.   Lakshmi R, Ranjani R, Syam Sundar A, Baskaran M, Anandan M, Thiyagarajan V, Kumar V. Effect of temperature on storage of ethionamide during susceptibility testing. J Microbiol Infect Dis.2013;3:128-132.       

 

1260.   Srinivasan R, Venkatesan P. Bayesian model for spatial dependance and prediction of tuberculosis. Int J Res Med Health Sci.2013;3:1-6.     

 

1261.   Thomas BE, Suresh C, Jamuna M, Vijayalakshmi R, Waston B, Swaminathan S. What do we need to know about sexual risk vulnerability among married HIV positive individuals in serodiscordant relationships? – A study from South India . African J AIDS HIV Res.2013;1:8-15.         

 

1262.    Anuradha R, Babu S. Immunomodulation by filarial parasites. Int Trends Immun. 2013;1:12-20.               

 

1263.   Muthuswamy M, Prabuseenivasan, Kumar V. Screening of antitubercular activity of some medicinal plants from western ghats, India . Int J Pharm Bio Sci.2013;4: 328–334.                 

 

1264.   Dayal PL, Alexander LT, Ponnuraja C, Venkatesan P. Modelling of breast cancer survival data: A frailty model approach. Indian J App Res. 2013;3:1-3.

  

1265.   Venkatesan P, Mullai M. Self organizing neural networks in prediction. Int J Data Warehousing and Mining.2013;3:175-179.

       

1266.   Ramachandran G, Hemanth Kumar AK, Ponnuraja C, Ramesh K, Lakshmi R, Chandrasekharan C, Swaminathan S. Lack of association between plasma levels of non-nucleoside reverse transcriptase inhibiutors & virological outcomes during rifampicin co-administration in HIV-infected TB patients. Indian J Med Res. 2013;138:955-961.             

 

1267.   Kumar RS, Kumar AMV, Claassens M, Banurekha VV, Gomathi NS, Venkatesan P, Swaminathan S. Number of sputum specimens during treatment follow-up of tuberculosis patients: two or one? Public Health Action.2013;3:304–307.

1268.   Thomas BE, Suresh C, Sujatha V, Vijayalakshmi R, Basilea W, Swaminathan S. Disclosure of parental HIV status: Are parents telling their children and what are some factors influencing disclosure- A study from south India . Int J Public Health Epid.2013;2:108-113.             

1269.   Chiranjeevi B, Koyyada G, Prabuseenivasan S, Kumar V, Sujitha P, Kumar CG, Sridhar B, Shaik S, Chandrasekharam M. Iron-catalyzed aryl-aryl cross coupling route for the synthesis of 1-(2-amino)-phenyl) dibenzo[b,d]furan-2-ol derivatives and their biological evaluation. RSC Adv. 2013;3:16475–16485.     

1270.   Shenoy RK, Suma TK, Kumaraswami V, Rahmah N, Dhananjayan G, Padma S. Anti-filarial drugs in doses employed in mass drug administration in lymphatic filariasis elimination programme provide sustained benefits to children with Brugia Malayi i nfection: A long-term follow up study. J Commun Dis.2013;45: 123-134.

 


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